SCHEMBL5963100

SCHEMBL5963100

CC(C)[Si]1(C(C)C)OC[C@H]2O[C@@H](n3cnc4c(N)nc(N)nc43)[C@H](O)[C@@H]2O[Si](C(C)C)(C(C)C)O1

nearest known ligand 0.56

Predicted protein targets (top 18)

geneUniProtsupporting neighboursconfidence
▸ STING1 Q86WV6 7/20 0.47
▸ HSP90B1 P14625 1/20 0.45
▸ LMNA P02545 2/20 0.42
▸ KMT2A Q03164 2/20 0.42
▸ RAPGEF3 O95398 2/20 0.42
▸ GMNN O75496 1/20 0.42
▸ BLM P54132 1/20 0.42
▸ NPSR1 Q6W5P4 1/20 0.42
▸ RAPGEF4 Q8WZA2 1/20 0.42
▸ MEN1 O00255 1/20 0.42
▸ ALDH1A1 P00352 1/20 0.42
▸ HINT1 P49773 1/20 0.42
▸ RXFP1 Q9HBX9 1/20 0.42
▸ ADORA3 P0DMS8 1/20 0.42
▸ SLC29A1 Q99808 1/20 0.41
▸ NT5E P21589 1/20 0.41
▸ ADORA2A P29274 1/20 0.41
▸ ADORA2B P29275 1/20 0.41

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL22216550 0.91 ADORA3 (0.54) LMNARXFP1ADORA3NT5EADORA2A
SCHEMBL6936922 0.91 ADORA3 (0.51) STING1LMNAKMT2ARAPGEF3GMNN
SCHEMBL8594450 0.91 AHCY (0.50) STING1LMNAADORA3NT5EADORA2A
SCHEMBL19961896 0.91 ADORA3 (0.54) LMNARXFP1ADORA3NT5EADORA2A
SCHEMBL4757808 0.91 ADORA3 (0.54) LMNARXFP1ADORA3NT5EADORA2A
SCHEMBL13030116 0.91 NT5E (0.43) STING1LMNAKMT2ARAPGEF3GMNN
SCHEMBL10238968 0.90 SLC29A1 (0.39) STING1LMNAKMT2ARAPGEF3GMNN
SCHEMBL15763461 0.89 SLC29A1 (0.39) STING1LMNAKMT2ARAPGEF3GMNN
SCHEMBL22983991 0.88 STING1 (0.56) STING1LMNAKMT2ARAPGEF3GMNN
SCHEMBL6895355 0.88 STING1 (0.56) STING1LMNAKMT2ARAPGEF3GMNN

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 21 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-6972330-B2 Contacting N4-acetyl-5',3'-di-O-acetyl-2'-O- methyl cytidine with Lewis acid to form 2'-)-methyladenosine nucleoside which is converted to phosphoramidite SIRNA THERAPEUTICS, INC. (US) 2005-12-06 — — US claimed
US-20030204078-A1 Chemical synthesis of methoxy nucleosides RIBOZYME PHARMACEUTICALS, INC. 2003-10-30 — — US claimed
EP-1108724-A2 Synthesis of methoxy nucleosides and enzymatic nucleic acid molecules RIBOZYME PHARMACEUTICALS, INC. (US) 2001-06-20 — — EP claimed
US-5962675-A Chemical syntheses of 2'-O-methoxy purine nucleosides RIBOZYME PHARMACEUTICALS, INC. (US) 1999-10-05 — — US claimed
EP-0886641-A2 SYNTHESIS OF METHOXY NUCLEOSIDES AND ENZYMATIC NUCLEIC ACID MOLECULES RIBOZYME PHARMACEUTICALS, INC. (US) 1998-12-30 — — EP claimed
WO-1997026270-A2 SYNTHESIS OF METHOXY NUCLEOSIDES AND ENZYMATIC NUCLEIC ACID MOLECULES RIBOZYME PHARMACEUTICALS, INC. (US) 1997-07-24 — — WO claimed
US-7101993-B1 Oligonucleotides containing 2′-O-modified purines ISIS PHARMACEUTICALS, INC. (US) 2006-09-05 — — US disclosed
US-6972330-B2 Contacting N4-acetyl-5',3'-di-O-acetyl-2'-O- methyl cytidine with Lewis acid to form 2'-)-methyladenosine nucleoside which is converted to phosphoramidite SIRNA THERAPEUTICS, INC. (US) 2005-12-06 — — US disclosed
EP-1223173-B1 Novel 2'-O-alkyl nucleosides and phosphoramidites processes for the preparation and uses thereof ISIS PHARMACEUTICALS INC (US) 2005-07-13 — — EP disclosed
US-20040048826-A1 Oligonucleotides containing 2'-0-modified purines ISIS PHARMACEUTICALS, INC. 2004-03-11 — — US disclosed
EP-0651759-B1 NOVEL 2'-O-ALKYL NUCLEOSIDES AND PHOSPHORAMIDITES PROCESSES FOR THE PREPARATION AND USES THEREOF ISIS PHARMACEUTICALS INC (US) 2003-12-10 — — EP disclosed
US-20030204078-A1 Chemical synthesis of methoxy nucleosides RIBOZYME PHARMACEUTICALS, INC. 2003-10-30 — — US disclosed
EP-1223173-A2 Novel 2'-O-alkyl nucleosides and phosphoramidites processes for the preparation and uses thereof ISIS PHARMACEUTICALS, INC. (US) 2002-07-17 — — EP disclosed
US-6242592-B1 Process for the preparation of 2′-O-alkyl-guanosine, cytidine, and uridine phosphoramidites ISIS PHARMACEUTICALS, INC. 2001-06-05 — — US disclosed
US-6133438-A Process for the preparation of 2'-O-alkyl purine phosphoramidites ISIS PHARMACEUTICALS, INC. (US) 2000-10-17 — — US disclosed
US-5962675-A Chemical syntheses of 2'-O-methoxy purine nucleosides RIBOZYME PHARMACEUTICALS, INC. (US) 1999-10-05 — — US disclosed
US-5914396-A 2'-O-modified nucleosides and phosphoramidites ISIS PHARMACEUTICALS, INC. (US) 1999-06-22 — — US disclosed
US-5856466-A Process for the preparation of 2'-O-alkyl purine phosphoramidites ISIS PHARMACEUTICALS, INC. (US) 1999-01-05 — — US disclosed
US-5646265-A Process for the preparation of 2'-O-alkyl purine phosphoramidites ISIS PHARMCEUTICALS, INC. (US) 1997-07-08 — — US disclosed
US-5506351-A Process for the preparation of 2'-O-alkyl guanosine and related compounds ISIS PHARMACEUTICALS (US) 1996-04-09 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20030204078-A1 Chemical synthesis of methoxy nucleosides UMPS, PNP, NUDT1 STING1 1716/4885HSP90B1 2733/4885LMNA 1006/4885
US-20040048826-A1 Oligonucleotides containing 2'-0-modified purines NSUN2, RNMT, HNRNPL STING1 1230/4885HSP90B1 4063/4885LMNA 1199/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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