SCHEMBL3539728

SCHEMBL3539728

Clc1ccc2[nH]nc(-c3nc4ccncc4[nH]3)c2c1

nearest known ligand 0.58

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
KDM4E B2RXH2 1/20 0.58
NPC1 O15118 1/20 0.58
ALDH1A1 P00352 1/20 0.58
PKM P14618 1/20 0.58
HPGD P15428 1/20 0.58
RAB9A P51151 1/20 0.58
SMN1; SMN2 Q16637 1/20 0.58
CLK2 P49760 6/20 0.54
CLK3 P49761 6/20 0.54
DYRK1A Q13627 6/20 0.54
MAP3K8 P41279 1/20 0.52
PDPK1 O15530 1/20 0.51
CHUK O15111 1/20 0.50
CDK4 P11802 1/20 0.49
CCNA2 P20248 1/20 0.49
CCND1 P24385 1/20 0.49
CDK2 P24941 1/20 0.49
CCND3 P30281 1/20 0.49
FGFR1 P11362 6/20 0.49
FLT1 P17948 1/20 0.49

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3538139 0.91 ALDH1A1 (0.57) KDM4ENPC1ALDH1A1PKMHPGD
SCHEMBL3542692 0.86 PDPK1 (0.56) KDM4ENPC1ALDH1A1HPGDSMN1; SMN2
SCHEMBL3538807 0.84 ALDH1A1 (0.58) ALDH1A1PKMCLK2CLK3DYRK1A
SCHEMBL3531870 0.84 PDPK1 (0.71) CLK2CLK3DYRK1AMAP3K8PDPK1
SCHEMBL17555489 0.83 CLK2 (0.57) KDM4ENPC1ALDH1A1PKMHPGD
SCHEMBL3536504 0.82 FGFR1 (0.73) CLK2CLK3DYRK1AMAP3K8PDPK1
SCHEMBL15306836 0.80 CLK3 (0.71) CLK2CLK3DYRK1AMAP3K8PDPK1
SCHEMBL5951667 0.80 MAP3K8 (0.51) CLK2DYRK1AMAP3K8PDPK1CHUK
SCHEMBL3532319 0.79 PDPK1 (0.51) CLK2DYRK1AMAP3K8PDPK1CHUK
SCHEMBL15306839 0.78 WNT1 (0.70) CLK2CLK3DYRK1AMAP3K8CDK4

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7645773-B2 Thiazoles as inhibitors of 11β-hydroxysteroid dehydrogenase HOFFMANN-LA ROCHE INC. (US) 2010-01-12 US disclosed
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-20070167622-A1 [2-(3-chloro-phenyl)-thiazol-4-yl]-(octahydro-quinolin-1-yl)-methanone; azocan-1-yl-[2-(2,3-dichloro-phenyl)-thiazol-4-yl]-methanone; type II diabetes mellitus and metabolic syndrome GILLESPIE PAUL 2007-07-19 US disclosed
US-7064215-B2 Indazole benzimidazole compounds CHIRON CORPORATION (US) 2006-06-20 US disclosed
US-20060079564-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2006-04-13 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060079564-A1 Indazole benzimidazole compounds ABL1, ABL2, ALK KDM4E 2648/4885NPC1 1789/4885ALDH1A1 1562/4885
US-20070167622-A1 [2-(3-chloro-phenyl)-thiazol-4-yl]-(octahydro-quinolin-1-yl)-methanone; azocan-1-yl-[2-(2,3-dichloro-phenyl)-thiazol-4-yl]-methanone; type II diabetes mellitus and metabolic syndrome GOT2, PC, CYP11B2 KDM4E 1513/4885NPC1 891/4885ALDH1A1 707/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.