SCHEMBL888123

SCHEMBL888123

Cc1cn([C@H]2CC(O)[C@@H](CO[Si](C)(C)C(C)(C)C)O2)c(=O)[nH]c1=O

nearest known ligand 0.66

Predicted protein targets (top 3)

geneUniProtsupporting neighboursconfidence
TOP2A P11388 6/20 0.66
POLB P06746 1/20 0.61
TK1 P04183 2/20 0.58

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL888122 1.00 TOP2A (0.66) TOP2APOLBTK1
SCHEMBL31289405 1.00 TOP2A (0.66) TOP2APOLBTK1
SCHEMBL22315382 1.00 TOP2A (0.66) TOP2APOLBTK1
SCHEMBL21489337 1.00 TOP2A (0.66) TOP2APOLBTK1
SCHEMBL12570184 1.00 TOP2A (0.66) TOP2APOLBTK1
SCHEMBL30965353 0.90 POLB (0.59) TOP2APOLBTK1
SCHEMBL8987846 0.89 POLB (0.57) TOP2APOLBTK1
SCHEMBL2120098 0.89 TK1 (0.66) TOP2APOLBTK1
SCHEMBL8691895 0.89 LMNA (0.66) TOP2A
SCHEMBL20417805 0.89 TK1 (0.66) TOP2APOLBTK1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 119 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-12503730-B2 Detectable nucleotide analogues THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2025-12-23 US disclosed
US-20250236911-A1 DESIGN AND SYNTHESIS OF NOVEL DISULFIDE LINKER BASED NUCLEOTIDES AS REVERSIBLE TERMINATORS FOR DNA SEQUENCING BY SYNTHESIS THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2025-07-24 US disclosed
US-12337009-B2 Nucleotide derivatives and methods of use thereof THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2025-06-24 US disclosed
US-20250154580-A1 ENZYME TRANSLOCATORS IN NANOGAP WITH 3' -ESTERS ROBERT BOSCH GMBH (DE) 2025-05-15 US disclosed
US-20240376536-A1 DESIGN AND SYNTHESIS OF NOVEL DISULFIDE LINKER BASED NUCLEOTIDES AS REVERSIBLE TERMINATORS FOR DNA SEQUENCING BY SYNTHESIS THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2024-11-14 US disclosed
US-12006540-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2024-06-11 US disclosed
US-11999999-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2024-06-04 US disclosed
US-11959137-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK (US) 2024-04-16 US disclosed
US-20240067673-A1 MODIFIED NUCLEOSIDE OR NUCLEOTIDE BGI SHENZHEN (CN) 2024-02-29 US disclosed
CN-116656795-A Nucleotide derivatives and methods of use thereof 纽约哥伦比亚大学董事会 2023-08-29 CN disclosed
US-5623070-A Heteroatomic oligonucleoside linkages ISIS PHARMACEUTICALS, INC. (US) 1997-04-22 US disclosed
US-5618704-A Backbone-modified oligonucleotide analogs and preparation thereof through radical coupling ISIS PHARMACUETICALS, INC. (US) 1997-04-08 US disclosed
EP-0649429-A4 HETEROATOMIC OLIGONUCLEOSIDE LINKAGES. ISIS PHARMACEUTICALS INC (US) 1996-04-10 EP disclosed
US-5489677-A NUCLEASE RESISTANT OLIGONUCLEOTIDE ANALOGS ISIS PHARMACEUTICALS, INC. (US) 1996-02-06 US disclosed
EP-0649429-A1 HETEROATOMIC OLIGONUCLEOSIDE LINKAGES ISIS PHARMACEUTICALS, INC. (US) 1995-04-26 EP disclosed
US-5386023-A Backbone modified oligonucleotide analogs and preparation thereof through reductive coupling ISIS PHARMACEUTICALS (US) 1995-01-31 US disclosed
WO-1994000467-A1 HETEROATOMIC OLIGONUCLEOSIDE LINKAGES ISIS PHARMACEUTICALS, INC. (US) 1994-01-06 WO disclosed
EP-0064796-B1 PHOSPHORYLATING AGENT AND PROCESS FOR THE PHOSPHORYLATION OF ORGANIC HYDROXYL COMPOUNDS UNILEVER N.V. (NL) 1985-05-15 EP disclosed
US-4503233-A POLYNUCLEOTIDES INTERNATIONALE OCTROOI MAATSCHAPPIJ "OCTROPA" BV (NL) 1985-03-05 US disclosed
EP-0064796-A2 Phosphorylating agent and process for the phosphorylation of organic hydroxyl compounds UNILEVER N.V. (NL) 1982-11-17 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (8 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-11959137-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis POLRMT, RNGTT, MTR TOP2A 134/4885POLB 10/4885TK1 78/4885
US-20250236911-A1 DESIGN AND SYNTHESIS OF NOVEL DISULFIDE LINKER BASED NUCLEOTIDES AS REVERSIBLE TERMINATORS FOR DNA SEQUENCING BY SYNTHESIS RNGTT, POLRMT, MTR TOP2A 181/4885POLB 22/4885TK1 112/4885
US-12337009-B2 Nucleotide derivatives and methods of use thereof POLRMT, NSUN2, NUDT1 TOP2A 238/4885POLB 11/4885TK1 244/4885
US-20240376536-A1 DESIGN AND SYNTHESIS OF NOVEL DISULFIDE LINKER BASED NUCLEOTIDES AS REVERSIBLE TERMINATORS FOR DNA SEQUENCING BY SYNTHESIS RNGTT, POLRMT, MTR TOP2A 181/4885POLB 22/4885TK1 112/4885
US-11999999-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis POLRMT, RNGTT, MTR TOP2A 134/4885POLB 10/4885TK1 78/4885
US-12006540-B2 Synthesis of novel disulfide linker based nucleotides as reversible terminators for DNA sequencing by synthesis POLRMT, RNGTT, MTR TOP2A 134/4885POLB 10/4885TK1 78/4885
US-20240067673-A1 MODIFIED NUCLEOSIDE OR NUCLEOTIDE NT5C3B, NT5E, NT5C2 TOP2A 721/4885POLB 94/4885TK1 67/4885
US-12503730-B2 Detectable nucleotide analogues NT5C3B, NUDT1, RNGTT TOP2A 322/4885POLB 14/4885TK1 137/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.