Gemcitabine

Gemcitabine

SCHEMBL285130

Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)C2(F)F)c(=O)n1.O=P(O)(O)O

nearest known ligand 0.91

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

POLA1POLA2POLD1POLD2POLD3POLD4POLEPOLE2POLE3PRIM1PRIM2RRM1RRM2RRM2B

The experimentally established mechanism targets of Gemcitabine. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 19)

geneUniProtsupporting neighboursconfidence
POLA1 known ✓ P09884 2/20 0.65
PDE3A Q14432 3/20 0.91
PDE4D Q08499 1/20 0.91
SLC29A1 Q99808 1/20 0.91
LMNA P02545 3/20 0.56
THRB P10828 1/20 0.56
MTOR P42345 1/20 0.56
MDM2 Q00987 1/20 0.56
NCOA1 Q15788 1/20 0.56
NCOA3 Q9Y6Q9 1/20 0.56
CACNA1F O60840 2/20 0.46
ALB P02768 2/20 0.46
MAPT P10636 2/20 0.46
CACNA1D Q01668 2/20 0.46
CACNA1S Q13698 2/20 0.46
CACNA1C Q13936 2/20 0.46
POLB P06746 1/20 0.43
NT5E P21589 1/20 0.42
CDA P32320 1/20 0.41

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Gemcitabine SCHEMBL17978348 1.00 PDE3A (0.91) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL348218 1.00 PDE3A (0.91) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL350020 1.00 PDE3A (0.91) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL28334969 0.99 PDE3A (0.89) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL19137411 0.97 PDE3A (0.85) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL3975223 0.97 PDE3A (0.89) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL6761683 0.95 PDE3A (1.00) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL6369622 0.95 PDE3A (1.00) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL20827751 0.95 PDE3A (1.00) PDE3APDE4DSLC29A1POLA1LMNA
Gemcitabine SCHEMBL12737233 0.95 PDE3A (1.00) PDE3APDE4DSLC29A1POLA1LMNA

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 302 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20260048152-A1 GEMCITABINE INORGANIC-ORGANIC HYBRID NANOPARTICLES KARLSRUHER INSTITUT FUER TECH KOERPERSCHAFT DES OEFFENTLICHEN RECHTS (DE) 2026-02-19 US claimed
US-20250025426-A1 SYNERGISTIC TRANSPORT OF LIPOPHILIC AND HYDROPHILIC ACTIVE SUBSTANCES IN NANOPARTICLES Karlsruher Institut für Technologie (DE) 2025-01-23 US claimed
CN-118986933-A Nanometer preparation for delivering medicine on demand aiming at inherent barrier of pancreatic cancer, and preparation method and application thereof 复旦大学 2024-11-22 CN claimed
EP-4444275-A1 SYNERGISTIC TRANSPORT OF LIPOPHILIC AND HYDROPHILIC ACTIVE SUBSTANCES IN NANOPARTICLES Karlsruher Institut für Technologie (DE) 2024-10-16 EP claimed
US-20240042045-A1 NANOPARTICLES CONTAINING MULTIPLE CLEAVABLE PRODUGS FOR CANCER THERAPY NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT 2024-02-08 US claimed
US-11845938-B2 Aptamer compositions and the use thereof CITY OF HOPE (US) 2023-12-19 US claimed
WO-2023104380-A1 SYNERGISTIC TRANSPORT OF LIPOPHILIC AND HYDROPHILIC ACTIVE SUBSTANCES IN NANOPARTICLES Karlsruher Institut für Technologie (DE) 2023-06-15 WO claimed
CN-116249525-A Nanoparticles containing multiple cleavable prodrugs for cancer therapy 芝加哥大学 2023-06-09 CN claimed
EP-4190312-A1 SYNERGISTIC TRANSPORT OF LIPOPHILIC AND HYDROPHILIC ACTIVE AGENTS INTO NANOPARTICLES Karlsruher Institut für Technologie (DE) 2023-06-07 EP claimed
EP-4188361-A1 NANOPARTICLES CONTAINING MULTIPLE CLEAVABLE PRODUGS FOR CANCER THERAPY The University of Chicago (US) 2023-06-07 EP claimed
WO-2017125413-A1 MESOPOROUS ORGANOSILICA NANOPARTICLES, PRODUCTION METHOD THEREOF AND USES OF SAME CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE (FR) 2017-07-27 WO claimed
WO-2017127697-A1 ENCAPSULATION AND HIGH LOADING EFFICIENCY OF PHOSPHORYLATED DRUG AND IMAGING AGENTS IN NANOPARTICLES THE PENN STATE RESEARCH FOUNDATION (US) 2017-07-27 WO claimed
US-20160271072-A1 POLYMER NANOPARTICLES CONTAINING MULTIPLE AGENTS AND METHODS THEREOF THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL (US) 2016-09-22 US claimed
EP-3060201-A1 POLYMER NANOPARTICLES CONTAINING MULTIPLE AGENTS AND METHODS THEREOF The University of North Carolina At Chapel Hill (US) 2016-08-31 EP claimed
US-20150246137-A1 LIPID COATED NANOPARTICLES CONTAINING AGENTS HAVING LOW AQUEOUS AND LIPID SOLUBILITIES AND METHODS THEREOF NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT 2015-09-03 US claimed
US-20150182634-A1 Molecular Design and Chemical Synthesis of Pharmaceutical-Ligands and Pharmaceutical-Pharmaceutical Analogs with Multiple Mechanisms of Action MISSISSIPPI STATE UNIVERSITY 2015-07-02 US claimed
WO-2015061468-A1 POLYMER NANOPARTICLES CONTAINING MULTIPLE AGENTS AND METHODS THEREOF THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL (US) 2015-04-30 WO claimed
US-20120201872-A1 LIPOSOMES COMPRISING A CALCIUM PHOSPHATE-CONTAINING PRECIPITATE THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL (US) 2012-08-09 US claimed
EP-2428201-A1 Oral administration of nucleoside monophosphates Merck Serono S.A. (CH) 2012-03-14 EP claimed
WO-2011017297-A2 BIODEGRADABLE DELIVERY SYSTEM COMPLEXES FOR THE DELIVERY OF BIOACTIVE COMPOUNDS THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL (US) 2011-02-10 WO claimed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (6 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20120201872-A1 LIPOSOMES COMPRISING A CALCIUM PHOSPHATE-CONTAINING PRECIPITATE LIPA, PLA2G2C, CHERP POLA1 4735/4885PDE3A 2247/4885PDE4D 2735/4885
US-20260048152-A1 GEMCITABINE INORGANIC-ORGANIC HYBRID NANOPARTICLES GOT1, RNMT, GNAO1 POLA1 102/4885PDE3A 936/4885PDE4D 1933/4885
US-20150246137-A1 LIPID COATED NANOPARTICLES CONTAINING AGENTS HAVING LOW AQUEOUS AND LIPID SOLUBILITIES AND METHODS THEREOF LIPA, LIPC, LIPG POLA1 4461/4885PDE3A 1892/4885PDE4D 3143/4885
US-11845938-B2 Aptamer compositions and the use thereof RNGTT, PABPC4, DNTT POLA1 1094/4885PDE3A 2635/4885PDE4D 2094/4885
US-20240042045-A1 NANOPARTICLES CONTAINING MULTIPLE CLEAVABLE PRODUGS FOR CANCER THERAPY LDLR, LRP6, LIPG POLA1 1285/4885PDE3A 4186/4885PDE4D 4691/4885
US-20160271072-A1 POLYMER NANOPARTICLES CONTAINING MULTIPLE AGENTS AND METHODS THEREOF LIPA, NPC1, PHOSPHO1 POLA1 2959/4885PDE3A 3321/4885PDE4D 4471/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.