Chlorhexidine

Chlorhexidine

SCHEMBL3616

Cl.Cl.N=C(NCCCCCCNC(=N)NC(=N)Nc1ccc(Cl)cc1)NC(=N)Nc1ccc(Cl)cc1

nearest known ligand 0.45

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

ABL1ACEACHEACVR1ADRA1AADRA1BADRA1DADRA2AADRA2BADRA2CADRB1ADRB2ADRB3AGTR1ALKAVPR1AAVPR2BCHEBCRCA2CACNA1ACACNA1BCACNA1CCACNA1DCACNA1ECACNA1FCACNA1GCACNA1HCACNA1ICACNA1SCACNA2D1CACNA2D2CACNA2D3CACNA2D4CACNB1CACNB2CACNB3CACNB4CACNG1CACNG2CACNG3CACNG4CACNG5CACNG6CACNG7CACNG8CALCRLCASRCCR5CDK4CDK6CFBCHRM1CHRM2CHRM3CHRM4CHRM5CHRNA1CHRNA3CHRNA7CHRNB1CHRNB4CHRNDCHRNECHRNGCOXFA4COXFA4L2CRBNCSF1RCUL4ACYP19A1DDB1DPP4DRD1DRD2DRD3DRD4EDNRAEGFREML4ERBB2ERBB4ESR1ESR2FGFR1FGFR3FLT1FLT3FLT4GAAGABRA1GABRA2GABRA3GABRA4GABRA5GABRA6GABRB1GABRB2GABRB3GABRDGABREGABRG1GABRG2GABRG3GABRPGABRQGHSRGLAGNRHRGPD2GRIN1GRIN2AGRIN2BGRIN2CGRIN2DGRIN3AGRIN3BGSTP1HCN4HCRTR1HCRTR2HDAC1HDAC10HDAC11HDAC2HDAC3HDAC4HDAC5HDAC6HDAC7HDAC8HDAC9HRH1HRH2HRH3HSD11B1HSP90AA1HSP90AB1HTR1AHTR1BHTR1DHTR1EHTR1FHTR2AHTR2BHTR2CHTR3AHTR3BHTR3CHTR3DHTR3EHTR4HTR5AHTR6HTR7IMPDH1IMPDH2ITGA2BITGB3ITKJAK1JAK2KCNA1KCNA10KCNA2KCNA3KCNA4KCNA5KCNA6KCNA7KCNB1KCNB2KCNC1KCNC2KCNC3KCNC4KCND1KCND2KCND3KCNF1KCNG1KCNG2KCNG3KCNG4KCNH1KCNH2KCNH3KCNH4KCNH5KCNH6KCNH7KCNH8KCNJ2KCNJ3KCNJ5KCNK3KCNK9KCNQ1KCNQ2KCNQ3KCNQ4KCNQ5KCNS1KCNS2KCNS3KCNV1KCNV2KDRKITKLKB1LCKMMAOAMAOBMAPK14METMMP1MMP13MMP7MMP8MT-ND1MT-ND2MT-ND3MT-ND4MT-ND4LMT-ND5MT-ND6NDUFA1NDUFA10NDUFA11NDUFA12NDUFA13NDUFA2NDUFA3NDUFA5NDUFA6NDUFA7NDUFA8NDUFA9NDUFAB1NDUFAF1NDUFAF2NDUFAF3NDUFAF4NDUFB1NDUFB10NDUFB11NDUFB2NDUFB3NDUFB4NDUFB5NDUFB6NDUFB7NDUFB8NDUFB9NDUFC1NDUFC2NDUFS1NDUFS2NDUFS3NDUFS4NDUFS5NDUFS6NDUFS7NDUFS8NDUFV1NDUFV2NDUFV3NR3C1NS5ANTRK1NTRK2NTRK3ODC1OPRD1OPRK1OPRM1P2RY12PAHPARP1PDE3APDE3BPDE4APDE4BPDE4CPDE4DPDE5APDE7APDE7BPDE8APDE8BPDGFRAPDGFRBPIK3CAPIK3CDPNPPOLA1POLA2POLD1POLD2POLD3POLD4POLEPOLE2POLE3PPARGPRIM1PRIM2PRKCAPRKCBPRKCDPRKCEPRKCGPRKCHPRKCIPRKCQPRKCZPRKD1PRKD3PTGS1PTGS2RBX1RENRETROCK1ROCK2RPE65RRM1RRM2RRM2BS1PR1S1PR2S1PR3S1PR4S1PR5SCN10ASCN11ASCN1ASCN2ASCN3ASCN4ASCN5ASCN7ASCN8ASCN9ASCNN1ASCNN1BSCNN1GSIGMAR1SLC18A2SLC6A1SLC6A2SLC6A3SLC6A4SLC9A3SRCTACR1TOP1TOP2ATOP2BTTRTYMPdacAdacBdacCembAfolAftsIgyrAgyrBmrcAmrcBmrdAparCparEpolrplArplBrplCrplDrplErplFrplIrplJrplKrplLrplMrplNrplOrplPrplQrplRrplSrplTrplUrplVrplWrplXrplYrpmArpmBrpmCrpmDrpmErpmE2rpmFrpmGrpmG1rpmG2rpmG3rpmHrpmIrpmJrpsArpsBrpsCrpsDrpsErpsFrpsGrpsHrpsIrpsJrpsKrpsLrpsMrpsNrpsOrpsPrpsQrpsRrpsSrpsTrpsUykgMykgO

The experimentally established mechanism targets of Chlorhexidine. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ HDAC8 known ✓ Q9BY41 1/20 0.42
▸ SLC6A3 known ✓ Q01959 3/20 0.39
▸ SMN1; SMN2 Q16637 3/20 0.45
▸ LMNA P02545 2/20 0.45
▸ MEN1 O00255 4/20 0.41
▸ KMT2A Q03164 4/20 0.41
▸ CNR1 P21554 3/20 0.41
▸ ALDH1A1 P00352 2/20 0.41
▸ MAPT P10636 2/20 0.41
▸ HTT P42858 1/20 0.41
▸ USP2 O75604 2/20 0.39
▸ GBA1 P04062 1/20 0.39
▸ MC4R P32245 1/20 0.39
▸ RAD52 P43351 1/20 0.39
▸ RCE1 Q9Y256 1/20 0.39
▸ TP53 P04637 1/20 0.39
▸ CYP3A4 P08684 1/20 0.39
▸ HPGD P15428 1/20 0.39
▸ ALOX15 P16050 1/20 0.39
▸ MAPK1 P28482 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Chlorhexidine SCHEMBL728183 1.00 SMN1; SMN2 (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL10808378 1.00 SMN1; SMN2 (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL3617 1.00 SMN1; SMN2 (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL3984 0.98 LMNA (0.46) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL1551122 0.98 LMNA (0.46) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL1550787 0.98 LMNA (0.46) SMN1; SMN2LMNAHDAC8MEN1KMT2A
SCHEMBL6365499 0.98 LMNA (0.46) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL23117798 0.97 LMNA (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL6437831 0.97 LMNA (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A
Chlorhexidine SCHEMBL2478603 0.97 LMNA (0.45) SMN1; SMN2LMNAHDAC8MEN1KMT2A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Appears in 9599 patents — a generic fragment claimed broadly, so it's down-weighted as IP noise. Top by claim status then date:

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-4743053-A1 ANTIMICROBIAL SYNERGIES Symrise AG (DE) 2026-05-20 — — EP claimed
EP-4554551-B1 3-HYDROXYPROPYLESTERS AS ANTIMICROBIAL AGENTS SYMRISE AG (DE) 2026-03-11 — — EP claimed
US-20260048080-A1 COMPOSITIONS OF AND METHODS FOR DAIRY ANIMAL TEAT DIP WEBCO CHEMICAL CORP (US) 2026-02-19 — — US claimed
US-20260048181-A1 ANTIMICROBIAL POLYCARBONATE COATINGS BOARD OF REGENTS, THE UNIVERSITY OF TEXAS SYSTEM (US) 2026-02-19 — — US claimed
US-20260041095-A1 A PRESERVATION METHOD ANALYTICON DISCOVERY ZWEIGNIEDERLASSUNG DER BRAIN BIOTECH AG (DE) 2026-02-12 — — US claimed
US-20260041094-A1 Compositions Comprising an Antimicrobial Boosting Agent SYMRISE AG (DE) 2026-02-12 — — US claimed
US-12544346-B2 Aqueous antiseptic composition having improved antibacterial persistence comprising chlorhexidine or derivative thereof and fabric type antiseptic comprising same HUONS CO., LTD. (KR) 2026-02-10 — — US claimed
US-20260034044-A1 A PRESERVATIVE COMPOSITION ANALYTICON DISCOVERY ZWEIGNIEDERLASSUNG DER BRAIN BIOTECH AG (DE) 2026-02-05 — — US claimed
US-12458663-B2 Compositions of and methods for dairy animal teat dip WEBCO CHEMICAL CORPORATION (US) 2025-11-04 — — US claimed
US-20250332120-A1 COMPOSITION FOR EXTERNAL PREPARATION KAO CORPORATION (JP) 2025-10-30 — — US claimed
EP-0140498-B1 CARIES-PREVENTIVE COMPOSITION LION CORPORATION (JP) 1989-05-31 — — EP claimed
EP-0306455-A1 Cyclodextrin complexes of bis-biguanido hexane compounds WARNER-LAMBERT COMPANY (US) 1989-03-08 — — EP claimed
US-4789662-A CHLORHEXIDINE AND ITS SALTS PIERRE FABRE MEDICAMENT (FR) 1988-12-06 — — US claimed
US-4714563-A CHLORHEXIDINE THE PROCTER & GAMBLE COMPANY (US) 1987-12-22 — — US claimed
US-4693888-A ANTIBODY OBTAINED BY IMMUNIZING MAMMAL WITH STREPTOCOCCUS MUTANS DERIVED ANTIGEN, AND SYNERGIST LION CORPORATION (JP) 1987-09-15 — — US claimed
US-4645662-A PREVENTING AND REMEDYING DENTAL HYPERSENSITIVITY LION CORPORATION (JP) 1987-02-24 — — US claimed
US-4587266-A BACTERICIDES, BISGUANIDES AND AMIDOAMINE OXIDES JOHNSON & JOHNSON BABY PRODUCTS COMPANY (US) 1986-05-06 — — US claimed
EP-0140498-A1 Caries-preventive composition LION CORPORATION (JP) 1985-05-08 — — EP claimed
US-4252826-A CARBOXYLATE OF A METHYL POLYETHOXYLATED GLUCOSIDE AND A PRESERVATIVE AGENT L'OREAL (FR) 1981-02-24 — — US claimed
US-4196201-A Non-irritating eye make-up remover composition L'OREAL (FR) 1980-04-01 — — US claimed
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