Spermidine

Spermidine

SCHEMBL7928492

Cl.Cl.Cl.NCCCCNCCCN.NCCCCNCCCN.NCCCCNCCCN

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

ABL1ACEACHEACVR1ADRA1AADRA1BADRA1DADRA2AADRA2BADRA2CADRB1ADRB2ADRB3AGTR1ALKAVPR1AAVPR2BCHEBCRCA2CACNA1ACACNA1BCACNA1CCACNA1DCACNA1ECACNA1FCACNA1GCACNA1HCACNA1ICACNA1SCACNA2D1CACNA2D2CACNA2D3CACNA2D4CACNB1CACNB2CACNB3CACNB4CACNG1CACNG2CACNG3CACNG4CACNG5CACNG6CACNG7CACNG8CALCRLCASRCCR5CDK4CDK6CFBCHRM1CHRM2CHRM3CHRM4CHRM5CHRNA1CHRNA3CHRNA7CHRNB1CHRNB4CHRNDCHRNECHRNGCOXFA4COXFA4L2CRBNCSF1RCUL4ACYP19A1DDB1DPP4DRD1DRD2DRD3DRD4EDNRAEGFREML4ERBB2ERBB4ESR1ESR2FGFR1FGFR3FLT1FLT3FLT4GAAGABRA1GABRA2GABRA3GABRA4GABRA5GABRA6GABRB1GABRB2GABRB3GABRDGABREGABRG1GABRG2GABRG3GABRPGABRQGHSRGLAGNRHRGPD2GRIN1GRIN2AGRIN2BGRIN2CGRIN2DGRIN3AGRIN3BGSTP1HCN4HCRTR1HCRTR2HDAC1HDAC10HDAC11HDAC2HDAC3HDAC4HDAC5HDAC6HDAC7HDAC8HDAC9HRH1HRH2HRH3HSD11B1HSP90AA1HSP90AB1HTR1AHTR1BHTR1DHTR1EHTR1FHTR2AHTR2BHTR2CHTR3AHTR3BHTR3CHTR3DHTR3EHTR4HTR5AHTR6HTR7IMPDH1IMPDH2ITGA2BITGB3ITKJAK1JAK2KCNA1KCNA10KCNA2KCNA3KCNA4KCNA5KCNA6KCNA7KCNB1KCNB2KCNC1KCNC2KCNC3KCNC4KCND1KCND2KCND3KCNF1KCNG1KCNG2KCNG3KCNG4KCNH1KCNH2KCNH3KCNH4KCNH5KCNH6KCNH7KCNH8KCNJ2KCNJ3KCNJ5KCNK3KCNK9KCNQ1KCNQ2KCNQ3KCNQ4KCNQ5KCNS1KCNS2KCNS3KCNV1KCNV2KDRKITKLKB1LCKMMAOAMAOBMAPK14METMMP1MMP13MMP7MMP8MT-ND1MT-ND2MT-ND3MT-ND4MT-ND4LMT-ND5MT-ND6NDUFA1NDUFA10NDUFA11NDUFA12NDUFA13NDUFA2NDUFA3NDUFA5NDUFA6NDUFA7NDUFA8NDUFA9NDUFAB1NDUFAF1NDUFAF2NDUFAF3NDUFAF4NDUFB1NDUFB10NDUFB11NDUFB2NDUFB3NDUFB4NDUFB5NDUFB6NDUFB7NDUFB8NDUFB9NDUFC1NDUFC2NDUFS1NDUFS2NDUFS3NDUFS4NDUFS5NDUFS6NDUFS7NDUFS8NDUFV1NDUFV2NDUFV3NR3C1NS5ANTRK1NTRK2NTRK3ODC1OPRD1OPRK1OPRM1P2RY12PAHPARP1PDE3APDE3BPDE4APDE4BPDE4CPDE4DPDE5APDE7APDE7BPDE8APDE8BPDGFRAPDGFRBPIK3CAPIK3CDPNPPOLA1POLA2POLD1POLD2POLD3POLD4POLEPOLE2POLE3PPARGPRIM1PRIM2PRKCAPRKCBPRKCDPRKCEPRKCGPRKCHPRKCIPRKCQPRKCZPRKD1PRKD3PTGS1PTGS2RBX1RENRETROCK1ROCK2RPE65RRM1RRM2RRM2BS1PR1S1PR2S1PR3S1PR4S1PR5SCN10ASCN11ASCN1ASCN2ASCN3ASCN4ASCN5ASCN7ASCN8ASCN9ASCNN1ASCNN1BSCNN1GSIGMAR1SLC18A2SLC6A1SLC6A2SLC6A3SLC6A4SLC9A3SRCTACR1TOP1TOP2ATOP2BTTRTYMPdacAdacBdacCembAfolAftsIgyrAgyrBmrcAmrcBmrdAparCparEpolrplArplBrplCrplDrplErplFrplIrplJrplKrplLrplMrplNrplOrplPrplQrplRrplSrplTrplUrplVrplWrplXrplYrpmArpmBrpmCrpmDrpmErpmE2rpmFrpmGrpmG1rpmG2rpmG3rpmHrpmIrpmJrpsArpsBrpsCrpsDrpsErpsFrpsGrpsHrpsIrpsJrpsKrpsLrpsMrpsNrpsOrpsPrpsQrpsRrpsSrpsTrpsUykgMykgO

The experimentally established mechanism targets of Spermidine. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ CA2 known ✓ P00918 4/20 0.93
▸ ESR1 known ✓ P03372 1/20 0.60
▸ LMNA P02545 3/20 1.00
▸ SMN1; SMN2 Q16637 1/20 1.00
▸ CA12 O43570 5/20 0.93
▸ CA6 P23280 5/20 0.93
▸ CA7 P43166 5/20 0.93
▸ CA9 Q16790 5/20 0.93
▸ CA14 Q9ULX7 5/20 0.93
▸ CA5B Q9Y2D0 5/20 0.93
▸ CA4 P22748 4/20 0.93
▸ CA5A P35218 4/20 0.93
▸ ALOX15 P16050 3/20 0.93
▸ CA3 P07451 3/20 0.93
▸ F13A1 P00488 2/20 0.93
▸ CYP1A2 P05177 2/20 0.93
▸ THPO P40225 2/20 0.93
▸ CA1 P00915 2/20 0.93
▸ UBE2N P61088 1/20 0.93
▸ CYP2C9 P11712 1/20 0.93

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Spermidine SCHEMBL573651 1.00 LMNA (1.00) LMNASMN1; SMN2CA12CA6CA7
Spermidine SCHEMBL3623585 1.00 LMNA (1.00) LMNASMN1; SMN2CA12CA6CA7
Spermidine SCHEMBL573341 1.00 LMNA (1.00) LMNASMN1; SMN2CA12CA6CA7
Spermidine SCHEMBL343877 1.00 LMNA (1.00) LMNASMN1; SMN2CA12CA6CA7
Spermidine SCHEMBL29150448 0.97 LMNA (0.94) LMNASMN1; SMN2CA12CA6CA7
Hydrochloric Acid SCHEMBL9392489 0.97 LMNA (0.94) LMNASMN1; SMN2CA12CA6CA7
Hydrochloric Acid SCHEMBL31268131 0.97 LMNA (0.94) LMNASMN1; SMN2CA12CA6CA7
Spermidine SCHEMBL2514294 0.97 LMNA (0.94) LMNASMN1; SMN2CA12CA6CA7
Hydrochloric Acid SCHEMBL8186500 0.97 LMNA (0.94) LMNASMN1; SMN2CA12CA6CA7
Hydrochloric Acid SCHEMBL30866180 0.97 LMNA (0.93) LMNASMN1; SMN2CA12CA6CA7

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 22 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
CN-116687959-B Chondroitin sulfate biological polyamine complex, and preparation method and application thereof 朱小丰 2024-10-22 — — CN disclosed
CN-116687959-A Chondroitin sulfate biological polyamine complex, and preparation method and application thereof 朱小丰 2023-09-05 — — CN disclosed
US-6235468-B1 CLASSIFYING TEST SAMPLE OF GENOMIC NUCLEOTIDE SEQUENCES; INCUBATE TEST SAMPLE WITH PRIMER, EXPAND PRIMER, DETERMINE GENETIC VARATION IN SEQUENCES OF THE AMPLIFICATION PRODUCTS ZENECA LIMITED (GB) 2001-05-22 — — US disclosed
EP-0530009-B1 Method of characterising genomic DNA ZENECA LTD (GB) 1999-01-13 — — EP disclosed
US-5853989-A Method of characterisation of genomic DNA ZENECA LIMITED (GB) 1998-12-29 — — US disclosed
US-5811235-A AMPLIFICATION OF TANDEMLY REPEATED REGION OF GENOMIC DNA, SEPARATION OF SET OF AMPLIFICATION PRODUCTS TO PROVIDE SAMPLE CODE ZENECA LIMITED (GB) 1998-09-22 — — US disclosed
US-5773257-A GENETIC ENGINEERING STRATAGENE (US) 1998-06-30 — — US disclosed
US-5646019-A Method for producing primed nucleic acid templates STRATAGENE (US) 1997-07-08 — — US disclosed
US-5605824-A THERMOSTABLE DNA POLYMERASE, POLYNUCLEOTIDE AMPLIFICATION PRIMER, TARGETS, MAGNESIUM COMPOUNDS AS ACTIVATOR, BUFFER AND NONIONIC DETERGENTS STRATAGENE (US) 1997-02-25 — — US disclosed
EP-0731177-A2 Method of characterising genomic DNA ZENECA LIMITED (GB) 1996-09-11 — — EP disclosed
EP-0530009-A2 Method of characterising genomic DNA ZENECA LIMITED (GB) 1993-03-03 — — EP disclosed
EP-0186271-B1 METHOD OF CHARACTERISING A TEST SAMPLE OF GENOMIC DNA THE LISTER INSTITUTE OF PREVENTIVE MEDICINE Royal National Orthopaedic Hospital (GB) 1991-12-18 — — EP disclosed
WO-1991006679-A1 AN IMPROVED METHOD FOR HYBRIDIZING NUCLEIC ACIDS USING SINGLE-STRANDED NUCLEIC ACID BINDING PROTEIN STRATAGENE (US) 1991-05-16 — — WO disclosed
EP-0370719-A2 Extended nucleotide sequences IMPERIAL CHEMICAL INDUSTRIES PLC (GB) 1990-05-30 — — EP disclosed
EP-0342717-A2 Polynucleotide probes THE LISTER INSTITUTE OF PREVENTIVE MEDICINE Royal National Orthopaedic Hospital (GB) 1989-11-23 — — EP disclosed
US-4843006-A GENETIC VECTORS MONSANTO COMPANY (US) 1989-06-27 — — US disclosed
EP-0108045-B1 RECA PROMOTER DEPENDENT POLYPEPTIDE PRODUCTION Monsanto Company (US) 1988-12-07 — — EP disclosed
EP-0186271-A1 Method of characterising a test sample of genomic DNA THE LISTER INSTITUTE OF PREVENTIVE MEDICINE Royal National Orthopaedic Hospital (GB) 1986-07-02 — — EP disclosed
WO-1986002948-A1 POLYNUCLEOTIDE PROBES LISTER INSTITUTE OF PREVENTIVE MEDICINE (GB) 1986-05-22 — — WO disclosed
EP-0108045-A1 RecA promoter dependent polypeptide production Monsanto Company (US) 1984-05-09 — — EP disclosed
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