3-Deazaneplanocin A

3-Deazaneplanocin A

SCHEMBL29379532

Cl.Nc1nccc2c1ncn2[C@@H]1C=C(CO)[C@@H](O)[C@H]1O

nearest known ligand 0.97

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

ABL1ACEACHEACVR1ADRA1AADRA1BADRA1DADRA2AADRA2BADRA2CADRB1ADRB2ADRB3AGTR1ALKAVPR1AAVPR2BCHEBCRCA2CACNA1ACACNA1BCACNA1CCACNA1DCACNA1ECACNA1FCACNA1GCACNA1HCACNA1ICACNA1SCACNA2D1CACNA2D2CACNA2D3CACNA2D4CACNB1CACNB2CACNB3CACNB4CACNG1CACNG2CACNG3CACNG4CACNG5CACNG6CACNG7CACNG8CALCRLCASRCCR5CDK4CDK6CFBCHRM1CHRM2CHRM3CHRM4CHRM5CHRNA1CHRNA3CHRNA7CHRNB1CHRNB4CHRNDCHRNECHRNGCOXFA4COXFA4L2CRBNCSF1RCUL4ACYP19A1DDB1DPP4DRD1DRD2DRD3DRD4EDNRAEGFREML4ERBB2ERBB4ESR1ESR2FGFR1FGFR3FLT1FLT3FLT4GAAGABRA1GABRA2GABRA3GABRA4GABRA5GABRA6GABRB1GABRB2GABRB3GABRDGABREGABRG1GABRG2GABRG3GABRPGABRQGHSRGLAGNRHRGPD2GRIN1GRIN2AGRIN2BGRIN2CGRIN2DGRIN3AGRIN3BGSTP1HCN4HCRTR1HCRTR2HDAC1HDAC10HDAC11HDAC2HDAC3HDAC4HDAC5HDAC6HDAC7HDAC8HDAC9HRH1HRH2HRH3HSD11B1HSP90AA1HSP90AB1HTR1AHTR1BHTR1DHTR1EHTR1FHTR2AHTR2BHTR2CHTR3AHTR3BHTR3CHTR3DHTR3EHTR4HTR5AHTR6HTR7IMPDH1IMPDH2ITGA2BITGB3ITKJAK1JAK2KCNA1KCNA10KCNA2KCNA3KCNA4KCNA5KCNA6KCNA7KCNB1KCNB2KCNC1KCNC2KCNC3KCNC4KCND1KCND2KCND3KCNF1KCNG1KCNG2KCNG3KCNG4KCNH1KCNH2KCNH3KCNH4KCNH5KCNH6KCNH7KCNH8KCNJ2KCNJ3KCNJ5KCNK3KCNK9KCNQ1KCNQ2KCNQ3KCNQ4KCNQ5KCNS1KCNS2KCNS3KCNV1KCNV2KDRKITKLKB1LCKMMAOAMAOBMAPK14METMMP1MMP13MMP7MMP8MT-ND1MT-ND2MT-ND3MT-ND4MT-ND4LMT-ND5MT-ND6NDUFA1NDUFA10NDUFA11NDUFA12NDUFA13NDUFA2NDUFA3NDUFA5NDUFA6NDUFA7NDUFA8NDUFA9NDUFAB1NDUFAF1NDUFAF2NDUFAF3NDUFAF4NDUFB1NDUFB10NDUFB11NDUFB2NDUFB3NDUFB4NDUFB5NDUFB6NDUFB7NDUFB8NDUFB9NDUFC1NDUFC2NDUFS1NDUFS2NDUFS3NDUFS4NDUFS5NDUFS6NDUFS7NDUFS8NDUFV1NDUFV2NDUFV3NR3C1NS5ANTRK1NTRK2NTRK3ODC1OPRD1OPRK1OPRM1P2RY12PAHPARP1PDE3APDE3BPDE4APDE4BPDE4CPDE4DPDE5APDE7APDE7BPDE8APDE8BPDGFRAPDGFRBPIK3CAPIK3CDPNPPOLA1POLA2POLD1POLD2POLD3POLD4POLEPOLE2POLE3PPARGPRIM1PRIM2PRKCAPRKCBPRKCDPRKCEPRKCGPRKCHPRKCIPRKCQPRKCZPRKD1PRKD3PTGS1PTGS2RBX1RENRETROCK1ROCK2RPE65RRM1RRM2RRM2BS1PR1S1PR2S1PR3S1PR4S1PR5SCN10ASCN11ASCN1ASCN2ASCN3ASCN4ASCN5ASCN7ASCN8ASCN9ASCNN1ASCNN1BSCNN1GSIGMAR1SLC18A2SLC6A1SLC6A2SLC6A3SLC6A4SLC9A3SRCTACR1TOP1TOP2ATOP2BTTRTYMPdacAdacBdacCembAfolAftsIgyrAgyrBmrcAmrcBmrdAparCparEpolrplArplBrplCrplDrplErplFrplIrplJrplKrplLrplMrplNrplOrplPrplQrplRrplSrplTrplUrplVrplWrplXrplYrpmArpmBrpmCrpmDrpmErpmE2rpmFrpmGrpmG1rpmG2rpmG3rpmHrpmIrpmJrpsArpsBrpsCrpsDrpsErpsFrpsGrpsHrpsIrpsJrpsKrpsLrpsMrpsNrpsOrpsPrpsQrpsRrpsSrpsTrpsUykgMykgO

The experimentally established mechanism targets of 3-Deazaneplanocin A. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 7)

geneUniProtsupporting neighboursconfidence
▸ AHCY P23526 12/20 0.97
▸ EZH2 Q15910 1/20 0.97
▸ AHCYL1 O43865 2/20 0.63
▸ CDA P32320 1/20 0.47
▸ SMN1; SMN2 Q16637 1/20 0.46
▸ DNMT1 P26358 1/20 0.45
▸ DNMT3B Q9UBC3 1/20 0.45

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
3-Deazaneplanocin A SCHEMBL20595432 1.00 AHCY (0.97) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL4304150 1.00 AHCY (0.97) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL12280318 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL874126 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL12321313 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL23683021 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL863851 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL1521229 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL18256281 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2
3-Deazaneplanocin A SCHEMBL29358420 0.99 AHCY (1.00) AHCYEZH2AHCYL1CDASMN1; SMN2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 77 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20250263669-A1 INDUCED TOTIPOTENT STEM CELLS AND PREPARATION METHOD THEREFOR UNIV TSINGHUA (CN) 2025-08-21 — — US claimed
EP-4394030-A1 INDUCED TOTIPOTENT STEM CELLS AND PREPARATION METHOD THEREFOR Tsinghua University (CN) 2024-07-03 — — EP claimed
CN-118147053-A Culture system, kit and method for inducing mesenchymal stem cells 成都赛济元生物医药有限公司 2024-06-07 — — CN claimed
CN-118048296-A Culture system, kit and method for reprogramming cells 成都赛济元生物医药有限公司 2024-05-17 — — CN claimed
EP-4271399-A1 ENHANCED DIFFERENTIATION OF BETA CELLS Vertex Pharmaceuticals Incorporated (US) 2023-11-08 — — EP claimed
CN-115725495-A Induced totipotent stem cell and preparation method thereof 清华大学 2023-03-03 — — CN claimed
WO-2023025302-A1 INDUCED TOTIPOTENT STEM CELLS AND PREPARATION METHOD THEREFOR 清华大学 2023-03-02 — — WO claimed
US-20220233646-A1 ENHANCED DIFFERENTIATION OF BETA CELLS VERTEX PHARMACEUTICALS INCORPORATED 2022-07-28 — — US claimed
WO-2022147056-A1 ENHANCED DIFFERENTIATION OF BETA CELLS VERTEX PHARMACEUTICALS INCORPORATED (US) 2022-07-07 — — WO claimed
US-20220144902-A1 METHOD FOR INDUCING MUSCULAR CELLS USING CELLS IN SPOT URINE NIPPON SHINYAKU CO., LTD. (JP) 2022-05-12 — — US claimed
EP-3990624-A1 ENHANCED DIFFERENTIATION OF BETA CELLS Vertex Pharmaceuticals Incorporated (US) 2022-05-04 — — EP claimed
US-12637661-B2 Methods of enhancing stem cell differentiation into beta cells VERTEX PHARMACEUTICALS INCORPORATED (US) 2026-05-26 — — US disclosed
US-20260015582-A1 METHODS OF T CELL DIFFERENTIATION AND COMPOSITIONS THEREOF THE CHILDREN'S MEDICAL CENTER CORPORATION (US) 2026-01-15 — — US disclosed
US-20260000735-A1 ENHANCED DIFFERENTIATION OF BETA CELLS VERTEX PHARMACEUTICALS INCORPORATED (US) 2026-01-01 — — US disclosed
US-20250354117-A1 METHODS OF GENERATING NATURAL KILLER CELLS FROM PLURIPOTENT STEM CELLS AND COMPOSITIONS THEREOF CHILDRENS MEDICAL CT CORP (US) 2025-11-20 — — US disclosed
US-20220144902-A1 METHOD FOR INDUCING MUSCULAR CELLS USING CELLS IN SPOT URINE NIPPON SHINYAKU CO., LTD. (JP) 2022-05-12 — — US disclosed
EP-3990624-A1 ENHANCED DIFFERENTIATION OF BETA CELLS Vertex Pharmaceuticals Incorporated (US) 2022-05-04 — — EP disclosed
WO-2022065859-A1 METHOD FOR DIRECT REPROGRAMMING FROM SOMATIC CELLS INTO PANCREATIC BETA CELLS BY USING MICRORNA, AND DIFFERENTIATION COMPOSITION 성균관대학교산학협력단 2022-03-31 — — WO disclosed
EP-3954382-A1 WATER SOLUBLE ADJUVANT AND COMPOSITION CONTAINING SAME Sumitomo Dainippon Pharma Co., Ltd. (JP) 2022-02-16 — — EP disclosed
EP-3949983-A1 WATER SOLUBLE ADJUVANT Sumitomo Dainippon Pharma Co., Ltd. (JP) 2022-02-09 — — EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (4 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20260015582-A1 METHODS OF T CELL DIFFERENTIATION AND COMPOSITIONS THEREOF CD4, CD47, CD63 AHCY 962/4885EZH2 776/4885AHCYL1 787/4885
US-12637661-B2 Methods of enhancing stem cell differentiation into beta cells IAPP, CBX6, HLA-C AHCY 2937/4885EZH2 226/4885AHCYL1 556/4885
US-20260000735-A1 ENHANCED DIFFERENTIATION OF BETA CELLS IAPP, PNLIP, PPARD AHCY 3680/4885EZH2 1796/4885AHCYL1 3438/4885
US-20220233646-A1 ENHANCED DIFFERENTIATION OF BETA CELLS IAPP, AMY2A, RNASE1 AHCY 1973/4885EZH2 2680/4885AHCYL1 1783/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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