Serotonin

Serotonin

SCHEMBL379650

Cl.NCCc1c[nH]c2ccc(O)cc12

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

ABL1ACEACHEACVR1ADRA1AADRA1BADRA1DADRA2AADRA2BADRA2CADRB1ADRB2ADRB3AGTR1ALKAVPR1AAVPR2BCHEBCRCA2CACNA1ACACNA1BCACNA1CCACNA1DCACNA1ECACNA1FCACNA1GCACNA1HCACNA1ICACNA1SCACNA2D1CACNA2D2CACNA2D3CACNA2D4CACNB1CACNB2CACNB3CACNB4CACNG1CACNG2CACNG3CACNG4CACNG5CACNG6CACNG7CACNG8CALCRLCASRCCR5CDK4CDK6CFBCHRM1CHRM2CHRM3CHRM4CHRM5CHRNA1CHRNA3CHRNA7CHRNB1CHRNB4CHRNDCHRNECHRNGCOXFA4COXFA4L2CRBNCSF1RCUL4ACYP19A1DDB1DPP4DRD1DRD2DRD3DRD4EDNRAEGFREML4ERBB2ERBB4ESR1ESR2FGFR1FGFR3FLT1FLT3FLT4GAAGABRA1GABRA2GABRA3GABRA4GABRA5GABRA6GABRB1GABRB2GABRB3GABRDGABREGABRG1GABRG2GABRG3GABRPGABRQGHSRGLAGNRHRGPD2GRIN1GRIN2AGRIN2BGRIN2CGRIN2DGRIN3AGRIN3BGSTP1HCN4HCRTR1HCRTR2HDAC1HDAC10HDAC11HDAC2HDAC3HDAC4HDAC5HDAC6HDAC7HDAC8HDAC9HRH1HRH2HRH3HSD11B1HSP90AA1HSP90AB1HTR1AHTR1BHTR1DHTR1EHTR1FHTR2AHTR2BHTR2CHTR3AHTR3BHTR3CHTR3DHTR3EHTR4HTR5AHTR6HTR7IMPDH1IMPDH2ITGA2BITGB3ITKJAK1JAK2KCNA1KCNA10KCNA2KCNA3KCNA4KCNA5KCNA6KCNA7KCNB1KCNB2KCNC1KCNC2KCNC3KCNC4KCND1KCND2KCND3KCNF1KCNG1KCNG2KCNG3KCNG4KCNH1KCNH2KCNH3KCNH4KCNH5KCNH6KCNH7KCNH8KCNJ2KCNJ3KCNJ5KCNK3KCNK9KCNQ1KCNQ2KCNQ3KCNQ4KCNQ5KCNS1KCNS2KCNS3KCNV1KCNV2KDRKITKLKB1LCKMMAOAMAOBMAPK14METMMP1MMP13MMP7MMP8MT-ND1MT-ND2MT-ND3MT-ND4MT-ND4LMT-ND5MT-ND6NDUFA1NDUFA10NDUFA11NDUFA12NDUFA13NDUFA2NDUFA3NDUFA5NDUFA6NDUFA7NDUFA8NDUFA9NDUFAB1NDUFAF1NDUFAF2NDUFAF3NDUFAF4NDUFB1NDUFB10NDUFB11NDUFB2NDUFB3NDUFB4NDUFB5NDUFB6NDUFB7NDUFB8NDUFB9NDUFC1NDUFC2NDUFS1NDUFS2NDUFS3NDUFS4NDUFS5NDUFS6NDUFS7NDUFS8NDUFV1NDUFV2NDUFV3NR3C1NS5ANTRK1NTRK2NTRK3ODC1OPRD1OPRK1OPRM1P2RY12PAHPARP1PDE3APDE3BPDE4APDE4BPDE4CPDE4DPDE5APDE7APDE7BPDE8APDE8BPDGFRAPDGFRBPIK3CAPIK3CDPNPPOLA1POLA2POLD1POLD2POLD3POLD4POLEPOLE2POLE3PPARGPRIM1PRIM2PRKCAPRKCBPRKCDPRKCEPRKCGPRKCHPRKCIPRKCQPRKCZPRKD1PRKD3PTGS1PTGS2RBX1RENRETROCK1ROCK2RPE65RRM1RRM2RRM2BS1PR1S1PR2S1PR3S1PR4S1PR5SCN10ASCN11ASCN1ASCN2ASCN3ASCN4ASCN5ASCN7ASCN8ASCN9ASCNN1ASCNN1BSCNN1GSIGMAR1SLC18A2SLC6A1SLC6A2SLC6A3SLC6A4SLC9A3SRCTACR1TOP1TOP2ATOP2BTTRTYMPdacAdacBdacCembAfolAftsIgyrAgyrBmrcAmrcBmrdAparCparEpolrplArplBrplCrplDrplErplFrplIrplJrplKrplLrplMrplNrplOrplPrplQrplRrplSrplTrplUrplVrplWrplXrplYrpmArpmBrpmCrpmDrpmErpmE2rpmFrpmGrpmG1rpmG2rpmG3rpmHrpmIrpmJrpsArpsBrpsCrpsDrpsErpsFrpsGrpsHrpsIrpsJrpsKrpsLrpsMrpsNrpsOrpsPrpsQrpsRrpsSrpsTrpsUykgMykgO

The experimentally established mechanism targets of Serotonin. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
HTR2C known ✓ P28335 7/20 1.00
HTR2A known ✓ P28223 7/20 1.00
HTR1A known ✓ P08908 6/20 1.00
HTR2B known ✓ P41595 2/20 1.00
HTR1D known ✓ P28221 5/20 0.97
HTR7 known ✓ P34969 3/20 0.97
HTR1B known ✓ P28222 3/20 0.97
HTR5A known ✓ P47898 2/20 0.97
HTR6 known ✓ P50406 2/20 0.97
HTR3E known ✓ A5X5Y0 1/20 0.97
HTR3B known ✓ O95264 1/20 0.97
DRD1 known ✓ P21728 1/20 0.97
HTR1E known ✓ P28566 1/20 0.97
HTR1F known ✓ P30939 1/20 0.97
DRD3 known ✓ P35462 1/20 0.97
HTR3A known ✓ P46098 1/20 0.97
SLC18A2 known ✓ Q05940 1/20 0.97
HTR4 known ✓ Q13639 1/20 0.97
HTR3D known ✓ Q70Z44 1/20 0.97
HTR3C known ✓ Q8WXA8 1/20 0.97

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Serotonin SCHEMBL25341783 1.00 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL29781387 1.00 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL8208967 1.00 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL6081529 0.98 HTR2C (0.97) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL6081535 0.98 HTR2C (0.97) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL30057954 0.98 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL183226 0.98 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL1495 0.98 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL29349412 0.98 HTR2C (1.00) HTR2CHTR2AHTR1AHTR2BNPSR1
Serotonin SCHEMBL396997 0.97 HTR2C (0.97) HTR2CHTR2AHTR1AHTR2BNPSR1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 783 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
CN-122063010-A Method for identifying ploidy of corbicula fluminea and application thereof 湖南农业大学 2026-05-19 CN claimed
EP-4358962-B1 TREATMENT FOR AUTOIMMUNE DISEASES COMPRISING NALTREXONE OR A METABOLITE OR ANALOG THEREOF, A CANNABINOID AND A 5-HT RECEPTOR AGONIST LDN PHARMA LTD (GB) 2026-02-04 EP claimed
US-20250281481-A1 NALTREXONE FOR BOOSTING THE THERAPEUTIC UTILTY OF 5-HT RECEPTOR AGONISTS LDN Pharma Limited (GB) 2025-09-11 US claimed
CN-119524805-A Serotonin-silica microsphere compound, preparation method thereof and sialylated glycocalyx protein extraction process 西北大学 2025-02-28 CN claimed
CN-119015514-A Hemostatic and antibacterial injectable microsphere for submucosal dissection and preparation method thereof 郑州大学 2024-11-26 CN claimed
CN-118765861-A Preparation method of rat acute pharyngitis model 河南省儿童医院郑州儿童医院 2024-10-15 CN claimed
US-20240293395-A1 NALTREXONE FOR IMPROVING THE EFFECTIVENESS OF 5-HT RECEPTOR SUBTYPE 2A, 2B or 2C AGONISTS LDN Pharma Limited (GB) 2024-09-05 US claimed
US-20240285612-A1 COMPOSITIONS COMPRISING AN AGONIST OF 5-HYDROXYTRYPTAMINE (5-HT) RECEPTOR SUBTYPE 3 LDN Pharma Limited (GB) 2024-08-29 US claimed
US-20240285613-A1 TREATMENT FOR AUTOIMMUNE DISEASES LDN Pharma Limited (GB) 2024-08-29 US claimed
CN-118512600-A Preparation method and antibacterial application of targeting molybdenum manganese oxide MRI (magnetic resonance imaging) nano probe 西安医学院第二附属医院 2024-08-20 CN claimed
EP-2118279-A1 NOVEL COMPOSITION FOR TREATING METABOLIC SYNDROME IPINTL, LLC (US) 2009-11-18 EP claimed
CN-101337921-A Method for preparing 5-hydroxytryptamine from hippophae rhamnoides QINGHAI QINGHUA BOZHONG BIOTEC (CN) 2009-01-07 CN claimed
WO-2008089212-A1 NOVEL COMPOSITION FOR TREATING METABOLIC SYNDROME IPINTL, LLC (US) 2008-07-24 WO claimed
US-20080176822-A1 NOVEL COMPOSITION FOR TREATING METABOLIC SYNDROME CHEN CHIEN-HUNG 2008-07-24 US claimed
CN-1166637-C Antibacterial activity, induction, separation and synthesis of N-acyltryptamine derivative as plant protecting chemical 中国农业大学 2004-09-15 CN claimed
US-20020173511-A1 Serotonergic compositions and methods for treatment of mild cognitive impairment WURTMAN RICHARD J (US) 2002-11-21 US claimed
CN-1365971-A Antibacterial activity, induction, separation and synthesis of N-acyltryptamine derivative as plant protecting chemical CHINESE AGRICULTRAL UNIV (CN) 2002-08-28 CN claimed
WO-2002038142-A2 SEROTONERGIC COMPOSITIONS AND METHODS FOR TREATMENT OF MILD COGNITIVE IMPAIRMENT MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2002-05-16 WO claimed
WO-2000032167-A9 A POLYSOME SDG INC (US) 2001-12-13 WO claimed
WO-2000032167-A1 A POLYSOME SDG, INC. (US) 2000-06-08 WO claimed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20240293395-A1 NALTREXONE FOR IMPROVING THE EFFECTIVENESS OF 5-HT RECEPTOR SUBTYPE 2A, 2B or 2C AGONISTS HTR2C, HTR2B, HTR2A HTR2C 1/4885HTR2A 3/4885HTR1A 5/4885
US-20250281481-A1 NALTREXONE FOR BOOSTING THE THERAPEUTIC UTILTY OF 5-HT RECEPTOR AGONISTS VDR, OPRD1, HTR1A HTR2C 14/4885HTR2A 11/4885HTR1A 3/4885
US-20240285612-A1 COMPOSITIONS COMPRISING AN AGONIST OF 5-HYDROXYTRYPTAMINE (5-HT) RECEPTOR SUBTYPE 3 HTR3A, HTR3C, HTR1A HTR2C 6/4885HTR2A 10/4885HTR1A 3/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.